Vignettes, Reference and Examples of package FSPMA
The zip archives on this page contain the examples used and
discussed in the FSPMA tutorial. The Makefile in FSPMAs doc
directory (the current directory) allows to generate all pdf
documents automatically.
- fspmatutorial.pdf:
- A tutorial to FSPMA
- reference.pdf:
- A Reference to FSPMA's definition file
- fspma.manual.pdf:
- The FSPMA manual (pdf version of R's html help).
- twochannel.zip:
- Analysis of two channel data: definition file and data
- singlechannel.zip:
- Analysis of single channel data: definition file and data
(modify this for Affymetrix like input.)
- logsingle.zip:
- Analysis of meta data: definition file and data
(log ratios without normalisation)
- normsingle.zip:
- Analysis of meta data: definition file and data
(normalised log ratios)
- libinterface.zip:
- Two channel data and definition file that enables interctions
with other libraries.
- fspma-tutorial.zip:
- All source files to generate the FSPMA tutorial. This
includes the vignette source fspma.Rnw which, given one has the
above data archives unziped, will produce fspma.tex and all embedded
output (see also the Makefile).
- fspma-reference.zip:
- All source files to generate the FSPMA reference.
- fspma-manual.zip:
- Source file to generate the printable FSPMA manual (pdf
version of the html help pages).